A dataset containing synthetic lab data for testing epidemiological data transformation functions.
Usage
data(lab_data)Format
A data frame with the following columns:
- nhs_number
NHS number
- local_patient_identifier
Patient identifier such as hospital number
- patient_birth_date
Date of birth of the patients.
- sex
Gender of the patients (Factor with levels: "Female", "Male").
- surname
Patient surname
- forename
Patient forename
- organism_species_name
Organism species name (Factor with levels: "KLEBSIELLA PNEUMONIAE").
- specimen_date
Date of specimen collection.
- specimen_type
Type of specimen: BLOOD or URINE.
- lab_code
Laboratory codes (Factor with unique levels).
- local_authority_name
Name of the local authority.
- local_authority_code
Code of the local authority.
- postcode
Postcode
Examples
data(lab_data)
head(lab_data)
#> nhs_number local_patient_identifier patient_birth_date sex surname
#> 1 576322970 IG12067 05/10/1938 Female WILLIAMS
#> 2 325999719 XB29898 04/04/1957 Male EL-SHAHEED
#> 3 705649596 KR2535 24/06/1927 Male LINTON
#> 4 115685428 HS45202 14/06/1962 Male RODA
#> 5 705649596 KR2535 24/06/1927 Male LINTON
#> 6 115685428 HS45202 14/06/1962 Male RODA
#> forename organism_species_name specimen_date specimen_type lab_code
#> 1 JAMILETH KLEBSIELLA PNEUMONIAE 24/05/2020 BLOOD BI20985
#> 2 ZAAHIR KLEBSIELLA PNEUMONIAE 08/07/2023 BLOOD JH70033
#> 3 KASHIEF STAPHYLOCOCCUS AUREUS 24/02/2023 BLOOD CU5997
#> 4 TYLER STAPHYLOCOCCUS AUREUS 26/08/2023 BLOOD ES3851
#> 5 KASHIEF STAPHYLOCOCCUS AUREUS 24/02/2023 BLOOD CU5997
#> 6 TYLER STAPHYLOCOCCUS AUREUS 26/08/2023 BLOOD ES3851
#> local_authority_name local_authority_code postcode
#> 1 Worthing E07000229 BN14 9EP
#> 2 Reading E06000038 RG1 7QE
#> 3 Plymouth E06000026 PL7 1LU
#> 4 Cheshire West and Chester E06000050 CW6 9TX
#> 5 Plymouth E06000026 PL7 1LU
#> 6 Cheshire West and Chester E06000050 CW6 9TX